I have worked with several IDEs, and have become most proficient in development of code using Microsoft Visual Studio.
Software: Wolfram Mathematica, MathWorks MATLAB, MapleSoft Maple, PTC Mathcad, OriginLab (LabTalk and Origin C), Mtplotlib, GPlot/gnuplot, Refworks, Zotero (+ CSL Editor), SciFinder, LaTeX (MiKTeX, Overleaf), Adobe Dreamweaver/Photoshop/Acrobat Pro, Autodesk AutoCAD, MatrixTSL Flowcode, Proteus PCB Design, PASCO Capstone, Cytoscape, Git.
Other: Microsoft Windows Server deployment/ management; Sun Grid Engine.
Recently DEVELOPED Software
20. Digital Cell Sorter (DCS): a cell type identification, anomaly detection, and Hopfield landscapes toolkit for single-cell transcriptomics. S. Domanskyi, A. Hakansson, T. Bertus, G. Paternostro, C. Piermarocchi, PeerJ, 9:e10670, (2021).
16. Polled Digital Cell Sorter (p-DCS): Automatic identification of hematological cell types from single cell RNA-sequencing clusters, S. Domanskyi, A. Szedlak, N. T. Hawkins, J. Wang, G. Paternostro, C. Piermarocchi, BMC Bioinformatics 20, Article number: 369 (2019).